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AGTTCAGCGAAGTCTTTGTACATCAACTCATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctataagtcccaaacgttctattctaatagtaatgcttgagtcccactagaaacaaggttggaacctcacatcatgcagtttattacttttgtatatctattcgtctatagatatgtttgatgcatgtattgaattgctttgcacatttactgatgttttccttttctgtacccag
species | Glycine max |
transcript | GLYMA11G12120.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATEST: gi|209712504|gb|BW653687.1|BW653687
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATEST: gi|207822639|gb|GD795694.1|GD795694
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATEST: gi|58021625|gb|CX708366.1|CX708366
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATEST: gi|254323448|gb|GR840145.1|GR840145
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAG-TTCTGATGATEST: gi|209729739|gb|BW669839.1|BW669839
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
EST: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAG TCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
genomic: CTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctat ... ctgtacccagTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTCAGCGAAGTCTTTGTACATCAACTCATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGgtatgtctataagtcccaaacgttctattctaatagtaatgcttgagtcccactagaaacaaggttggaacctcacatcatgcagtttattacttttgtatatctattcgtctatagatatgtttgatgcatgtattgaattgctttgcacatttactgatgttttccttttctgtacccag
- - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG