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AAAATTGGTTATGACAAGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgccatgttatacttgtttttccgtttgtcttgcttattttgacctctttctgaatattaaataaaaaatcatgtttgacatgcattaattct...
species | Glycine max |
transcript | GLYMA10G02040.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAG GAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTTEST: gi|254343540|gb|GR857296.1|GR857296
genomic: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgc ... gattgtttagGAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
EST: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAG GAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTTEST: gi|16343387|gb|BI968982.1|BI968982
genomic: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgc ... gattgtttagGAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
EST: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAG GAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTTEST: gi|58014928|gb|CX701670.1|CX701670
genomic: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgc ... gattgtttagGAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
EST: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAG GAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTTEST: gi|209708984|gb|BW653498.1|BW653498
genomic: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgc ... gattgtttagGAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
EST: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAG GAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
genomic: AGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgc ... gattgtttagGAAGCTGCATTGAAACTCGGAGTGCTCAGCTCTGAAGATTTTGACAAGCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAATTGGTTATGACAAGGCAGCAGCAGTTGCCAAGACAGCCCACAAAGAGGGGTGTACTCTTAAGgtgatgatgccatgttatacttgtttttccgtttgtcttgcttattttgacctctttctgaatattaaataaaaaatcatgtttgacatgcattaattct
- - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaataaaa