1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GTCATCCTATAAAAGCTGGTTTGCTTTTTTGATTAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaaggattaattatgaatttatggtttatgagttgtgagttctgactgatgtgaattttgtcttattgtttgtctgacatattcttggtgtagttt...
species | Glycine max |
transcript | GLYMA09G35050.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCAT AACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTCEST: gi|21993730|gb|BQ785258.1|BQ785258
genomic: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaagga ... ggctgtgcagAACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTC
EST: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCAT AACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTCEST: gi|21993593|gb|BQ785121.1|BQ785121
genomic: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaagga ... ggctgtgcagAACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTC
EST: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCAT AACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTCEST: gi|193484494|gb|FK450262.1|FK450262
genomic: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaagga ... ggctgtgcagAACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTC
EST: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCAT AACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTCEST: gi|214005044|gb|DB985418.1|DB985418
genomic: TAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaagga ... ggctgtgcagAACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTC
EST: AAATATGAGTATATGACACAGCTGGA-AATCCTCTCCTACTGTTTTCCAT AACAAGATGGAATAAAAGCCAATTCCATTGAATTGATCACTTTTTGACTTC
genomic: AAATATGAGTATATGACACAGCTGGACCAT-CTCTCCTACTGTTTTCCATgtaagaagga ... ggctgtgcagAACAAGATGAAATAAAAGCCAATCCCATTGAATTGATCACTTTTTGACTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATCCTATAAAAGCTGGTTTGCTTTTTTGATTAAATATGAGTATATGACACAGCTGGACCATCTCTCCTACTGTTTTCCATgtaagaaggattaattatgaatttatggtttatgagttgtgagttctgactgatgtgaattttgtcttattgtttgtctgacatattcttggtgtagttt
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA