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TGTTGTCCACGGTGATGAATTTGAGTACAATGATCCTGTGGATGGTTCCATCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttactgcttgagaaatattggttacaattaacttaatggaaaaaagctgaaatttcgtgtggtggtctttcagaattgaaaatgcatcttcttg...
species | Glycine max |
transcript | GLYMA08G04890.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|58019793|gb|CX706535.1|CX706535
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|19269460|gb|BM885716.1|BM885716
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|6567204|gb|AW234815.1|AW234815
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|12690328|gb|BG156664.1|BG156664
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|12691027|gb|BG157363.1|BG157363
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGGTGCAACAATTCGATTATAEST: gi|193597826|gb|FK549232.1|FK549232
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGG-TGCAACAATTCGATTATA
EST: ATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|6725125|gb|AW309524.1|AW309524
genomic: ATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGG-ACNTGGATCAGAAGGTGCAACAATTCGATTATAEST: gi|58015854|gb|CX702596.1|CX702596
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAAC-TGGATCAGAAGGTGCAACAATTCGATTATA
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|151406289|gb|EV276104.1|EV276104
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|57574755|gb|CX547730.1|CX547730
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|13789290|gb|BG651881.1|BG651881
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATACEST: gi|120530798|gb|EH258931.1|EH258931
genomic: TTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
EST: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTG ATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
genomic: TCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttac ... actactatagATTTTCCGCCTATCTGGAACTGGATCAGAAGGTGCAACAATTCGATTATAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGTCCACGGTGATGAATTTGAGTACAATGATCCTGTGGATGGTTCCATCTCATCACATCAGGGAATCCGATATTTGTTTGAGGATGGATCACGATTGgtgagtttactgcttgagaaatattggttacaattaacttaatggaaaaaagctgaaatttcgtgtggtggtctttcagaattgaaaatgcatcttcttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtggtgg