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ACATCATTTTGACCGCTGACACTATCCTGCTTGCTCTTACATAGTTGGGAACTGAAGATCCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAATgtatgctaaaacctgtgcactgtatttcaactttgtcaaaaatacttgagttgagtaaaattagggattgtgtcaattgggaagattctttgatgttaat...
species | Glycine max |
transcript | GLYMA04G09070.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: ACTGAAGATCCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAAT TCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCAEST: gi|208227129|gb|GE022368.1|GE022368
genomic: ACTGAAGATCCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAATgtatgctaaa ... gttttcgaagTCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCA
EST: CCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAAT TCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCAEST: gi|20811697|gb|BQ296175.1|BQ296175
genomic: CCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAATgtatgctaaa ... gttttcgaagTCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCA
EST: TTCTGAACAATGCAGTTCAGCATTAAT TCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCA
genomic: TTCTGAACAATGCAGTTCAGCATTAATgtatgctaaa ... gttttcgaagTCTACATGATGGGGTTCTCCTGGTCAGTCGTTCTACATGACTGGATGCTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATCATTTTGACCGCTGACACTATCCTGCTTGCTCTTACATAGTTGGGAACTGAAGATCCTCTTTGACAATTTTCTGAACAATGCAGTTCAGCATTAATgtatgctaaaacctgtgcactgtatttcaactttgtcaaaaatacttgagttgagtaaaattagggattgtgtcaattgggaagattctttgatgttaat
- - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA