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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGTTACAGgtgagtttgtgactgcaacttcattatgtgaacttccacactgctgctaggaaacctgtcagcagtgtatgtcttctaaatctattcttatattgtactcttcag

Basic information

species Glycine max
transcript GLYMA03G29280.1
intron # 16
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14126732|gb|BG791170.1|BG791170
EST:     CTCTTTTAATAGAGGAAAGTTACAG                         GTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC
genomic: CTCTTTTAATAGAGGAAAGTTACAGgtgagtttgt ... tactcttcagGTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC
EST: gi|8282536|gb|BE020027.1|BE020027
EST:     TTTAATAGAGGAAAGTTACAG                         GTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC
genomic: TTTAATAGAGGAAAGTTACAGgtgagtttgt ... tactcttcagGTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC
EST: gi|19935055|gb|BQ080085.1|BQ080085
EST:     CTCTTTTAATAGAGGAAAGTTACAG                         GTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC
genomic: CTCTTTTAATAGAGGAAAGTTACAGgtgagtttgt ... tactcttcagGTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATC