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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTGGTCTCGGAACTCTTCTTTCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttcactagatttattaatttctgaaaatactgctatgatgaattacttaaaaagccaaaataggctttaagctggaaagtgtcaaataaatttt...

Basic information

species Glycine max
transcript GLYMA03G24630.1
intron # 16
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G24630.1 (Glycine max), 5'ss of exon 16
lower sequence: GRMZM2G406672_T01 (Zea mays), 5'ss of exon 16
CATTGGTCTCGGAACTCTTCTTTCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttcactagatttattaatttctgaaaatactgctatgatgaattacttaaaaagccaaaataggctttaagctggaaagtgt--caaataaatttt-------
 || || || ||||| ||||| || || ||| || |  |||||||||| |||||||||||||||||||| ||||     || || ||| | ||    | | ||  |  |   |  |  |   | |         |   ||    || | ||| ||| | |      ||| ||||       
AATAGGGCTTGGAACCCTTCTGTCTGGTGCTCGGGTTATCTCTGATGGAATGCTGCAGGCTGCAGCTGAACGgtga--ctcccttgatctcttgccat-taaaccttgtaacacaaaaacacaatcgggctattact-tacatctttaactgtaaaatttactgtgtaactttttatgtag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208206859|gb|GE002552.1|GE002552
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|8284122|gb|BE021681.1|BE021681
EST:     TCAGGCGCTAGGATCCTCTCTTATGGCATGCTGCAAGCTGCAGCTGAGCG                         TCTGGCTTCATACATGAGTGAA
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAA
EST: gi|193663498|gb|FK604118.1|FK604118
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193708846|gb|FK644580.1|FK644580
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193414412|gb|FK377426.1|FK377426
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACTATTGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATAC-AT-GAGTGAAGAGGAGGTACTCAAAGGAATTATTTTC
EST: gi|193573139|gb|FK531444.1|FK531444
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|58018827|gb|CX705569.1|CX705569
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193342785|gb|FK309061.1|FK309061
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGGAGGTACTCAAAGGAATTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGG-AGGTACTCAAAGGAATTATTTTCC
EST: gi|193365950|gb|FK333311.1|FK333311
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193658508|gb|FK604173.1|FK604173
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|193597454|gb|FK551898.1|FK551898
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208251420|gb|GE049703.1|GE049703
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|58015662|gb|CX702404.1|CX702404
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193667463|gb|FK613537.1|FK613537
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|193686524|gb|FK626883.1|FK626883
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTAACTCAAAGGAATTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTA-CTCAAAGGAATTATTTTCC
EST: gi|193396567|gb|FK363707.1|FK363707
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTACAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|208302057|gb|GE100813.1|GE100813
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207810142|gb|GD780916.1|GD780916
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208310674|gb|GE106020.1|GE106020
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208097053|gb|GD896778.1|GD896778
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193549837|gb|FK507532.1|FK507532
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|13240420|gb|BG359729.1|BG359729
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCANGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207820411|gb|GD792865.1|GD792865
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTGTTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207830299|gb|GD803279.1|GD803279
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208318983|gb|GE112024.1|GE112024
EST:     TCAGGCGCTAGGATCGTTTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208286024|gb|GE081616.1|GE081616
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|17401415|gb|BM178197.1|BM178197
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193389779|gb|FK355868.1|FK355868
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAAGGAATTTATTTTC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAA-GGAATT-ATTTTC
EST: gi|208119623|gb|GD917430.1|GD917430
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193635258|gb|FK578901.1|FK578901
EST:     CGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTA-TTTCCC
genomic: CGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193675913|gb|FK617799.1|FK617799
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207796824|gb|GD768886.1|GD768886
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207781083|gb|GD754768.1|GD754768
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193542011|gb|FK496165.1|FK496165
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|207819146|gb|GD789850.1|GD789850
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193573223|gb|FK531486.1|FK531486
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208121146|gb|GD920297.1|GD920297
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|208263275|gb|GE064795.1|GE064795
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCC
EST: gi|193315482|gb|FK279308.1|FK279308
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACGTACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|192325221|gb|FK017562.1|FK017562
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCCAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|207819242|gb|GD789946.1|GD789946
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACCCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
EST: gi|193468938|gb|FK431490.1|FK431490
EST:     TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCG                         TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC
genomic: TCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttca ... gaaactgaagTCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CATTGGTCTCGGAACTCTTCTTTCAGGCGCTAGGATCGTCTCTGATGGCATGCTGCAGGCTGCAGCTGAGCGgtatatttcactagatttattaatttctgaaaatactgctatgatgaattacttaaaaagccaaaataggctttaagctggaaagtgtcaaataaatttt

- - - - - - - - - - - - - - - - - - - - - - - -  ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA