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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGTGGAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACAgtgagttcctagctccttactaatttttattggaactgttgactattaatggtttaattctgaacttcataatatattaggtctttctaatagtaaaaaa...

Basic information

species Glycine max
transcript GLYMA02G05950.1
intron # 16
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15589705|gb|BI674321.1|BI674321
EST:     GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACA                         GTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
genomic: GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACAgtgagttcct ... atgaaaatagGTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
EST: gi|192329023|gb|FK021405.1|FK021405
EST:     GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACA                         GTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
genomic: GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACAgtgagttcct ... atgaaaatagGTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
EST: gi|6846005|gb|AW348295.1|AW348295
EST:     GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACA                         GTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
genomic: GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACAgtgagttcct ... atgaaaatagGTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
EST: gi|58020577|gb|CX707319.1|CX707319
EST:     GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACA                         GTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA
genomic: GAATTGATGCATTGCCTGGCATGACAATTCTTTCTGCGTGCTTAGAGACAgtgagttcct ... atgaaaatagGTTAGTGGAGCTGGGCAAGGCTACTCACGGCCAGAAGACATCAATAGTGCA