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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTAGGGTTTGCCATAAGCTTACCGAAAAGCTAAAGAGGGAAATTATTCTAGGCTCATCAAGTATTGATGACCCATCACAATTTATTACGgtattgaagttttaccttttttctatgccaaatgcaatgtgtttcttaaccaggaattgccttgatcattcttccatgctatttttcctctgttgcag

Basic information

species Glycine max
transcript GLYMA01G42140.2
intron # 16
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254315420|gb|GR825229.1|GR825229
EST:     AAATTATTCTAGGCTCATCAAGTATTGATGACCCATCACAATTTATTACG                         AAATTAAAGACGATAACGACGCATGAGATTTCATTAGATGATATCCAGATA
genomic: AAATTATTCTAGGCTCATCAAGTATTGATGACCCATCACAATTTATTACGgtattgaagt ... tctgttgcagAAATTAAAGACGATAACGACGCATGAGATTTCATTAGATGATATCCAGATA
EST: gi|254337484|gb|GR845161.1|GR845161
EST:     AAATTATTCTAGGCTCATCAAGTATTGATGACCCATCACAATTTATTACG                         AAATTAAAGACGATAACGACGCATGAGATTTCATTAGATGATATCCAGATA
genomic: AAATTATTCTAGGCTCATCAAGTATTGATGACCCATCACAATTTATTACGgtattgaagt ... tctgttgcagAAATTAAAGACGATAACGACGCATGAGATTTCATTAGATGATATCCAGATA