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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAAATTGCTCAACCTCTATCAAAGCTTTGCCTTGAATTTCCAGACCTTTATATTGgtatgaagtttatgagttgttgtgatgtttaccagtatgttacttgctatctgattcgatctatatttttaattgtatttcttctttgtaacatctag

Basic information

species Glycine max
transcript GLYMA19G36860.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7283359|gb|AW595968.1|AW595968
EST:     TGCTCAACCTCTATCAAAGCTGTGCCTTGAATATCCAGACCTTTATATTG                         GTTGGTACCGCAAAGCCAGATATGGATCTCTTATAGTAAGCTTCATAGGAA
genomic: TGCTCAACCTCTATCAAAGCTTTGCCTTGAATTTCCAGACCTTTATATTGgtatgaagtt ... taacatctagGTTGTTACCGCAAAGCCAGATATGGATCTCTTATAGTAAGCTTCAAAGGAA
EST: gi|6667659|gb|AW279110.1|AW279110
EST:     TGCTCAACCTCTATCAAAGCTTTGCCTTGAATTTCCAGACCTTTATATTG                         GTTGTTACCGCACAGCCAGATATGGATCTCTTATAGTAAGCTTCAAACGAA
genomic: TGCTCAACCTCTATCAAAGCTTTGCCTTGAATTTCCAGACCTTTATATTGgtatgaagtt ... taacatctagGTTGTTACCGCAAAGCCAGATATGGATCTCTTATAGTAAGCTTCAAAGGAA