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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAATGATGACCGAGAACCCAGAGAAATATCAACACATGCTTCAGAATCTTGTTGTTAAGGCTCAGCAGgtacctcattttttaatagcatgcttgaagtccatatactatttagtaaagctgagattctatattaattttgcatctggatgagcttcatattcaaatt...

Basic information

species Glycine max
transcript GLYMA18G52540.1
intron # 15
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA18G52540.1 (Glycine max), 5'ss of exon 15
lower sequence: AT3G12590.1 (Arabidopsis thaliana), 5'ss of exon 16
CGAATGATGACCGAGAACCCAGAGAAATATCAACACATGCTTCAGAATCTTGTTGTTAAGGCTCAGCAGgtacc-------tcattttttaata---gcatgcttgaagtcc-atatactatttag-----taaagctgagattctatattaattttgcatc-tggatga----gcttcatattcaaatt-----------------
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AGGATGATGACGGAGGAACCAGAGAAATACCAAAACATGCTTCAGAAGCTTGTCTTTAAGGCTCAGCAGgtattgctatcgtcataattcagggtgtagatgcgtagaaccggaaatatcaaagagaacctcaaaatcaaagagctttctttgttttgtttcatgtataataatgatccacattgattgtattcttgttttgtgcag