1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
TTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgcttgccctgtgcacaaagaggcatatgctgtattgttcatgtgtttaactatttaagctaacatatttcttaacatgttgaaattttattt...
species | Glycine max |
transcript | GLYMA18G52270.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACC TGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAEST: gi|254344974|gb|GR855631.1|GR855631
genomic: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgc ... tgactgcagcTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
EST: CGTGGACCTGA-GTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCAC- TGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAEST: gi|10231708|gb|BE800596.1|BE800596
genomic: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgc ... tgactgcagcTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
EST: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACC TGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAEST: gi|10233753|gb|BE802641.1|BE802641
genomic: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgc ... tgactgcagcTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
EST: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACC TGTGACATACATAGATTCTAGTGCTGTTCACGCTTTGAAAGACTTGTATCAEST: gi|192300273|gb|FG988780.1|FG988780
genomic: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgc ... tgactgcagcTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
EST: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACC TGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
genomic: CGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgc ... tgactgcagcTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTTCGTGATTCTAGAGATGGCACGtaagtcttgcttgccctgtgcacaaagaggcatatgctgtattgttcatgtgtttaactatttaagctaacatatttcttaacatgttgaaattttattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG