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21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
CAATGTGCATGGCAACAAGTTGAATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttcacctcgacaaaatagggacatttgttagaatgtacctgcaattgtgttgtgtttggttctatttctttgtctttcgtataaacatgttatg...
species | Glycine max |
transcript | GLYMA17G34380.2 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: AATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTT GAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCGEST: gi|193312538|gb|FK275202.1|FK275202
genomic: AATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttca ... tcttccttagGAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCG
EST: CCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTT GAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCGEST: gi|193399341|gb|FK364801.1|FK364801
genomic: CCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttca ... tcttccttagGAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCG
EST: AATGGATCAATTCCCC-TTCTTTGCAGAGTTTGGAGAGCATGACCTCTTT GAATCTTTCTTCCAACAATCTTCAGGGCGEST: gi|193363851|gb|FK329657.1|FK329657
genomic: AATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttca ... tcttccttagGAATCTTTCTTCCAACAATCTTCAGGGCG
EST: CCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTT GAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCGEST: gi|208193231|gb|GD992004.1|GD992004
genomic: CCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttca ... tcttccttagGAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCG
EST: AATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTT GAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCG
genomic: AATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttca ... tcttccttagGAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATGTGCATGGCAACAAGTTGAATGGATCAATTCCCCCTTCTTTGCAGAGTTTGGAGAGCATGACCTCTTTgtaagtttcacctcgacaaaatagggacatttgttagaatgtacctgcaattgtgttgtgtttggttctatttctttgtctttcgtataaacatgttatg
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA