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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGATTAGCTCTGAAAGAAGGAGGAGCTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatcttatctatcctctatgtagatttatgagttacataaaatttagatcatcttaccaatattttttaataatttttattaaag

Basic information

species Glycine max
transcript GLYMA17G07050.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15203188|gb|BI425956.1|BI425956
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|15202467|gb|BI425417.1|BI425417
EST:     GGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: GGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|21594304|gb|BQ610119.1|BQ610119
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|15203101|gb|BI425869.1|BI425869
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|254332042|gb|GR846245.1|GR846245
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|105633983|gb|DW247346.1|DW247346
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGCCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCGCTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|4286168|gb|AI441008.1|AI441008
EST:     TGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGGACCCG-CAAATG                         GACTACATCTATGAAG
genomic: TGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACC-GTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAG
EST: gi|58024838|gb|CX711579.1|CX711579
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|7147143|gb|AW509065.1|AW509065
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|10710524|gb|BF010242.1|BF010242
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|254341893|gb|GR853030.1|GR853030
EST:     CTGAACTCGGCCCCTCAGTTTTATTC-TTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|254346951|gb|GR856673.1|GR856673
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|105634392|gb|DW247541.1|DW247541
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|14258698|gb|BG881606.1|BG881606
EST:     TGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: TGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
EST: gi|9258034|gb|BE346181.1|BE346181
EST:     CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATG                         GACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT
genomic: CTGAACTCGGCCCCTCAGTTTTATTCTTTGGATGCAGGAACCGTCAAATGgtgagttatc ... tttattaaagGACTACATCTATGAAGACGAGTTGAGTCACTTCGTTAATACTGGCGCACTT