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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAATCTATCATCCCAGCACCGGCTGAGgtatgcattttcatatatatgtttgcctgtttcttgtttccggcgagtatttttttatgtaaatttagcgaccaaccttatttactataattaagattct...

Basic information

species Glycine max
transcript GLYMA17G07040.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193387538|gb|FK350015.1|FK350015
EST:     GGAATCTATCATCCCAGCACCGGCTGAG                         GCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
genomic: GGAATCTATCATCCCAGCACCGGCTGAGgtatgcattt ... tgatttacagGCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
EST: gi|31457335|gb|CD399363.1|CD399363
EST:     GGAATCTATCATCCTAGCACCGGCTGAG                         GCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
genomic: GGAATCTATCATCCCAGCACCGGCTGAGgtatgcattt ... tgatttacagGCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
EST: gi|209709785|gb|BW674001.1|BW674001
EST:     GGAATCTATCATCCCAGCACCGGCTGAG                         GCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
genomic: GGAATCTATCATCCCAGCACCGGCTGAGgtatgcattt ... tgatttacagGCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
EST: gi|208255397|gb|GE054030.1|GE054030
EST:     AAGGGAATCTATCATCCCAGCACCGGCTGAG                         GCAGTATGTAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG
genomic: AAGGGAATCTATCATCCCAGCACCGGCTGAGgtatgcattt ... tgatttacagGCAGTATGCAATTAACAAAGCTGAGGATACTCACATTTGATGCCTGGCATG