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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGAGTTCGTGATCAATTATATTATTTACAGATGCTTGAGGCAGCCCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttcttggttttagtaatcctcatttttattgaatactctgttatctataataagattataagaccattttttccctttgttttggttatgcag

Basic information

species Glycine max
transcript GLYMA16G26850.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207731784|gb|GD707537.1|GD707537
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgcagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
EST: gi|208183613|gb|GD982885.1|GD982885
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgcagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
EST: gi|151413077|gb|EV282885.1|EV282885
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgcagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
EST: gi|209728281|gb|BW658493.1|BW658493
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgcagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
EST: gi|151398633|gb|EV268504.1|EV268504
EST:     TCAAGCTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgcagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATT