1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
TTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacctgatgcttaggacttgggagcattagggatcagattaagtgaatcttaaaatttcatttgcgttttatagtttagctctcctctaaataatgattgaggttctttttccaactaatttggtgttggggattgcag
species | Glycine max |
transcript | GLYMA13G29010.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTEST: gi|9258851|gb|BE346998.1|BE346998
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTEST: gi|58019102|gb|CX705844.1|CX705844
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTEST: gi|19345773|gb|BM890653.1|BM890653
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTEST: gi|9901230|gb|BE610198.1|BE610198
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTCTATCGTATATAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACTEST: gi|16344141|gb|BI969736.1|BI969736
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
EST: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAG GTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
genomic: ACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacc ... gggattgcagGTGAATGCAATTCAGTTGAAGGAGACAGTAGAGGAGAACACAAGCACCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCCAAAGGGTAGAGATGTGGAGGATGATGACTCATTTGTTTTTAATGAAGGGTTTACAGCTCCTCTTTATCGTATAAAGgtactatacctgatgcttaggacttgggagcattagggatcagattaagtgaatcttaaaatttcatttgcgttttatagtttagctctcctctaaataatgattgaggttctttttccaactaatttggtgttggggattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC