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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTATGTGGTTAACACTGGCACCCAGGACAAGTCAGGGGCTAAAAGGgtaaaacttaaaagagtttcctctatatttagggagaaaggggagaaggggtttctgtgtgatgatattgattggtgggataacatgtttcatgttttccag

Basic information

species Glycine max
transcript GLYMA13G25110.2
intron # 15
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G25110.2 (Glycine max), 5'ss of exon 15
lower sequence: Vv00s0818g00010.t01 (Vitis vinifera), 5'ss of exon 7
TTATGTGGTTAACACTGGCACCCAGGACAAGTCAGGGGCTAAAAGGgtaaaacttaaaagagtttcctctatatttagggagaaaggggagaaggggtttctgtgtgatg-atattgattggtgggataaca---tgtttcatgttttccag--
 || ||||| ||||||||||||||||||||| |||  || ||||||||||   ||       | || |||  || ||              |    ||||||     ||| |    |  |  | ||||||||   |  | |    | |||    
GTACGTGGTCAACACTGGCACCCAGGACAAGACAGCTGCCAAAAGGgtaaggatt-------tctcatctg-atgtatctttggtctttgtattttgtttcttgcaaatgcaagacggctattaggataacaaactactgcccagtctcctcct