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GAAGCAATGAAGCAGACTTATCAGAGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctttctttggtagcattacaaaaatgatgaaagctactaactttatatgctttactttccaaaattaatgctctcccagtaggcatcctaatt...
species | Glycine max |
transcript | GLYMA08G20930.2 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTTTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCEST: gi|26059109|gb|CA802023.1|CA802023
genomic: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
EST: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCEST: gi|193488465|gb|FK457604.1|FK457604
genomic: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
EST: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCEST: gi|193546379|gb|FK500022.1|FK500022
genomic: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
EST: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCEST: gi|193628216|gb|FK572756.1|FK572756
genomic: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
EST: CTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTCTGGTACATGGAGCAGTCATCCCTGCCTTTCTAACCATTGCTCAAGCEST: gi|10254178|gb|BE821944.1|BE821944
genomic: CTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
EST: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGA GGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
genomic: AGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctt ... gctatgtcagGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCAATGAAGCAGACTTATCAGAGAGCTATGAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAgtaagtgctttctttggtagcattacaaaaatgatgaaagctactaactttatatgctttactttccaaaattaatgctctcccagtaggcatcctaatt
- - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA