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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAACTAAAAAGCAGAATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAGgtaagagtgatgctacatttttttactttagcaattaagttgttgacttattagttgcatgatttttaattgattgacttccccctctccccttttttctcttatttaattatttggtttgtgtgattag

Basic information

species Glycine max
transcript GLYMA07G32480.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16343431|gb|BI969026.1|BI969026
EST:     ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAG                         CCATTGCACGCCAAAGTGCCTTCTTTTATTGGAGATAAGAGAATCAATCTC
genomic: ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAGgtaagagtga ... gtgtgattagCCATTGCACGCCAAAGTGCCTTCTTTTATTGGAGATAAGAGAATCAATCTC
EST: gi|31474112|gb|CD416140.1|CD416140
EST:     ATGCTACAACTGGGTTGCGGACTTGCAAAAACATGTGGACAATGACAAAG                         CCATTGCACGCCAAAGTGCCTTCTTTTATNGGAGATAAGAGAATCAATCTC
genomic: ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAGgtaagagtga ... gtgtgattagCCATTGCACGCCAAAGTGCCTTCTTTTATTGGAGATAAGAGAATCAATCTC
EST: gi|6725921|gb|AW310320.1|AW310320
EST:     ATGCTACAACTGGGTTGC-GACTTGCAATAACATTTTGACAATGACANAG                         CCATTGCACGCCAAAGTGCCTTTCTTTTATTGGAGATAAGAGAATCAATCT
genomic: ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAGgtaagagtga ... gtgtgattagCCATTGCACGCCAAAGTGCC-TTCTTTTATTGGAGATAAGAGAATCAATCT
EST: gi|31467136|gb|CD409164.1|CD409164
EST:     ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAG                         CCATTGCACGCCAAAGTGCCTTCTTTTATTGGAGATAAGAGAATCAATCTC
genomic: ATGCTACAACTGGGTTGCGGACTTGCAATAACATTTTGACAATGACAAAGgtaagagtga ... gtgtgattagCCATTGCACGCCAAAGTGCCTTCTTTTATTGGAGATAAGAGAATCAATCTC