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ACTTGGTTTTCTTGCTGAACCCTTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaactaagctttcctaatttagtcatgaaacctcaatcacataatttctggcttgagagcagcacttaacatttatgtttgccctgcattag
species | Glycine max |
transcript | GLYMA07G04680.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: GTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAAEST: gi|15337755|gb|BI498411.1|BI498411
genomic: GTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
EST: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAAEST: gi|10845108|gb|BF071065.1|BF071065
genomic: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
EST: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAAEST: gi|6502063|gb|AW203436.1|AW203436
genomic: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
EST: ATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAAEST: gi|193725821|gb|FK657721.1|FK657721
genomic: ATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
EST: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTAEST: gi|8283841|gb|BE021400.1|BE021400
genomic: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTA
EST: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGG CGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
genomic: CCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaa ... cctgcattagCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTGGTTTTCTTGCTGAACCCTTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGgtatgctgaactaagctttcctaatttagtcatgaaacctcaatcacataatttctggcttgagagcagcacttaacatttatgtttgccctgcattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT