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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACCAAGCTGCTTTTGTCCTGAGTGTGCCAAGAAGGAAGCCTTTGGATGAAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGgtgggcaatactacactacttgttgcttatgcttctggttgttgcagttaattaggtctctgctaagatgtcatactttgttgtacag

Basic information

species Glycine max
transcript GLYMA07G01890.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13240281|gb|BG359590.1|BG359590
EST:     AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAG                         GAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA
genomic: AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGgtgggcaata ... tgttgtacagGAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA
EST: gi|209700761|gb|BW683044.1|BW683044
EST:     AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAG                         GAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA
genomic: AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGgtgggcaata ... tgttgtacagGAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA
EST: gi|22930150|gb|BU547289.1|BU547289
EST:     AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAG                         GAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA
genomic: AAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGgtgggcaata ... tgttgtacagGAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACA