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TAGAGGATGCTACATAGACCAGAGTCAGAGCTTGAATATTCACATGGATCAACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgaccttcttccttgggtctagttaatgtcatttttcattggattgtgttcatgttgtctctaataaaggattttgtgtgtttggtagtatgttct...
species | Glycine max |
transcript | GLYMA05G32070.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|58022119|gb|CX708860.1|CX708860
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|31307786|gb|CD392989.1|CD392989
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: TACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|15812247|gb|BI784522.1|BI784522
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|208201785|gb|GE000965.1|GE000965
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|213614996|gb|DB978373.1|DB978373
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: TTAACTTCTTTGCATTTCTATGCATTATCAAAG GGTTTGAAGACTGGGATGTATTAAGGGCGATCACGTGCCGCAGCCGATGCTEST: gi|13791431|gb|BG654022.1|BG654022
genomic: TTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|58018661|gb|CX705403.1|CX705403
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|208287252|gb|GE084804.1|GE084804
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: TGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|58024594|gb|CX711335.1|CX711335
genomic: TGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|192293903|gb|FG986112.1|FG986112
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCTEST: gi|51335204|gb|CO979070.1|CO979070
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
EST: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAG GGTTTGAAGACTGGGATGTATTATCTTCGATCACGTGCCGCAGCAGATGCT
genomic: AACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgacct ... ggcatgaaagGGTTTGAAGACTGGGATGTATTATCTGCGATCACGTGCCGCAGCAGATGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAGGATGCTACATAGACCAGAGTCAGAGCTTGAATATTCACATGGATCAACCCAACTTTGGAAAGTTAACTTCTTTGCATTTCTATGCATGGTCAAAGgtatcgaccttcttccttgggtctagttaatgtcatttttcattggattgtgttcatgttgtctctaataaaggattttgtgtgtttggtagtatgttct
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