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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTTAAGGAGATCGTATACAACTACAGAAAGCAACCACATTGCAAACCACAAGTTTTTCGTAGTGTATTTGTTGATTGGTCATTGGCTCGCCGAAATGGGgtaactgaaggtcaaaattcgatgcttttgtaaatcttatccaacaattgtgacctcataactgatcttaatgaaaacag

Basic information

species Glycine max
transcript GLYMA04G36700.1
intron # 15
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G36700.1 (Glycine max), 5'ss of exon 15
lower sequence: Vv04s0008g02780.t01 (Vitis vinifera), 5'ss of exon 14
TTTTAAGGAGATCGTATACAACTACAGAAAGCAACCACATTGCAAACCACAAGTTTTTCGTAGTGTATTTGTTGATTGGTCATTGGCTCGCCGAAATGGGgta----actgaaggtcaaaattcgatgcttttgtaaatcttatccaacaattgtga-cctcataactgatcttaatgaaaacag
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CTTCAGGGAAATAATTCACAACTACAGGAAGCAGCCACAATGCAAGCCACAAATTTTCCGTAGTGTGTTTGTTGATTGGTCATCAGCACGCCGCAATGGAgtatgttgcttaatctctattctcttagtgttagcttctgttctatgggaaatctaagcctttcaactgattttgaacag-----