Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTATGCTGGATATGGGGGCAACTATGCGAATTCTCAATTGCCTACATCAGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagcagtttttctatttagttttagttattatttggcccctaatatgtatttgggttagtggatacagttctgttgtcatgtttgtcatttttta...

Basic information

species Glycine max
transcript GLYMA03G32410.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14991751|gb|BI317424.1|BI317424
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|7147266|gb|AW509188.1|AW509188
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|7924613|gb|AW830639.1|AW830639
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|254341006|gb|GR854734.1|GR854734
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|151402465|gb|EV272278.1|EV272278
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|51335228|gb|CO979094.1|CO979094
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
EST: gi|51343099|gb|CO983832.1|CO983832
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtgcacagca ... tgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTGGCTGCAGCCCCTGCA