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TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCGgtgagtttcatactagtttcattcttgtttctcatgtttcattttggggaaataacagcaaaagattttttcataataatatttccagttaatgatcaat...
species | Glycine max |
transcript | GLYMA03G01210.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCG ATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTGTCACCGGCCAAATGEST: gi|213588834|gb|DB984361.1|DB984361
genomic: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCGgtgagtttca ... ttctatgtagATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTGTCACCGGCCAAATG
EST: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCG ATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTCACACCGGCCAAATGEST: gi|209714421|gb|BW659105.1|BW659105
genomic: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCGgtgagtttca ... ttctatgtagATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTGTCACCGGCCAAATG
EST: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCG ATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTGTCACCGGCCAAATG
genomic: TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCGgtgagtttca ... ttctatgtagATCTTTACTCCAAGTGCCTATAGTGCACGTGTCTTTGTCACCGGCCAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGTGGTTTCATCGATCCGTAAAAGCTGATGACTGGGTGCTATTCGCGgtgagtttcatactagtttcattcttgtttctcatgtttcattttggggaaataacagcaaaagattttttcataataatatttccagttaatgatcaat
- - - - - - - - - - - AAGCTG
- - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttgggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcaaaaga