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TTACATTATCAGCCATCTTAAAAAGGAGATGCCTGCTATGATAGGCAAAGCTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatctttgtacatccgttttgcttatttgcttgtctctggcaagtgacaacacttaaaatgtatacacatgactgaattttgaaacag
species | Glycine max |
transcript | GLYMA02G46350.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAG GTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTTEST: gi|51343198|gb|CO983931.1|CO983931
genomic: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatct ... tttgaaacagGTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTT
EST: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAG GTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTTEST: gi|192313377|gb|FK005149.1|FK005149
genomic: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatct ... tttgaaacagGTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTT
EST: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCCGAATTTGGAAAG GTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTTEST: gi|13481375|gb|BG510718.1|BG510718
genomic: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatct ... tttgaaacagGTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTT
EST: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAG GTACAAAGGGAGTTCCATTTAEST: gi|192313376|gb|FK005148.1|FK005148
genomic: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatct ... tttgaaacagGTACAAAGGGAGTTCCATTTA
EST: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCCGAATTTGGAAAG GTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTT
genomic: CTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatct ... tttgaaacagGTACAAAGGGAGTTCCATTTACCTCCTGGCGATTTTCCAAATGTAGAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTACATTATCAGCCATCTTAAAAAGGAGATGCCTGCTATGATAGGCAAAGCTAAAGCTCAACAAAAGCTCATCGATAATTTGGCAGCTGAATTTGGAAAGgtatgaatctttgtacatccgttttgcttatttgcttgtctctggcaagtgacaacacttaaaatgtatacacatgactgaattttgaaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA