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GGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtcttcaaagtcaccataattcataaacaattcgttaatgatttttaagaacagcgataataattgggacactcggtgggtgttgagttgcaatggatatatatttctgttatgaattatatttttttacttctctaaattctttactag
species | Glycine max |
transcript | GLYMA20G16170.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCACEST: gi|10254011|gb|BE821777.1|BE821777
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
EST: TTNNNGTGTNNNCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCACEST: gi|13789096|gb|BG651687.1|BG651687
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
EST: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCACEST: gi|22523787|gb|BU082598.1|BU082598
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
EST: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCACEST: gi|192322574|gb|FK014695.1|FK014695
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
EST: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCACEST: gi|15286165|gb|BI470056.1|BI470056
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
EST: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAG GTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
genomic: TTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtctt ... tctttactagGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTCAAGAAGCCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACCGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGgtattgtcttcaaagtcaccataattcataaacaattcgttaatgatttttaagaacagcgataataattgggacactcggtgggtgttgagttgcaatggatatatatttctgttatgaattatatttttttacttctctaaattctttactag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG