1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GTGTGCAAAGGAAGCTGGATATGGCAAATGAGgtgagttgttctggatttctacttttgtcctttttccattttgcttactaacccaccccccacccacccacccacccatgccttctttttactcatttga...
species | Glycine max |
transcript | GLYMA16G17580.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GTGTGCAAAGGAAGCTGGATATGGCAAATGAG GATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATEST: gi|207834817|gb|GD807250.1|GD807250
genomic: GTGTGCAAAGGAAGCTGGATATGGCAAATGAGgtgagttgtt ... tcttatgaagGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATAT
EST: CAAAGGAAGCTGGATATGGCAAATGAG GATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATEST: gi|254345558|gb|GR851720.1|GR851720
genomic: CAAAGGAAGCTGGATATGGCAAATGAGgtgagttgtt ... tcttatgaagGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATAT
EST: GTGTGCAAAGGAAGCTGGATATGGCAAATGAG GATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATEST: gi|254345557|gb|GR851719.1|GR851719
genomic: GTGTGCAAAGGAAGCTGGATATGGCAAATGAGgtgagttgtt ... tcttatgaagGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATAT
EST: GTGTGCAAAGGAAGCTGGATATGGCAAATGAG GATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATAT
genomic: GTGTGCAAAGGAAGCTGGATATGGCAAATGAGgtgagttgtt ... tcttatgaagGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTGCAAAGGAAGCTGGATATGGCAAATGAGgtgagttgttctggatttctacttttgtcctttttccattttgcttactaacccaccccccacccacccacccacccatgccttctttttactcatttga
- - GCAAAG
- - - AAGGAA
- - - - - AAGCTG
- - - - - - GCTGGA