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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATGGACAACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCTgtaaggactcatgttttgctcataatttttagtttttattctttttgcttgttttttattcggaaaatgtttctagttaatttccgttttccattactct...

Basic information

species Glycine max
transcript GLYMA16G00780.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19270854|gb|BM887110.1|BM887110
EST:     AACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCT                         GAGATGCCATATAAGGGACGGGATCATTGACCACTTATAGTTGAATGCATT
genomic: AACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCTgtaaggactc ... tttttaacagGAGATGCCATATAAGGGACGGGATCATTGACCACTTATAGTTGAATGCATT
EST: gi|27445894|gb|CA953017.1|CA953017
EST:     AACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCT                         GAGATGCCATATAAGGGACGGGATCATTGACCACTTATAGTTGAATGCATT
genomic: AACTTCTTGGTCATCCTAGGCAAGTTTTATACATGCCAAGTTACCTCCCTgtaaggactc ... tttttaacagGAGATGCCATATAAGGGACGGGATCATTGACCACTTATAGTTGAATGCATT