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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTTATGAAGCAGAACTAAAGCGCGAAGAGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCTgtgagtaagcaggcatttttaatgttcctatttgaaggattgattttgcactggttcttttcttacctgtacagctgtgtgaaatttttttagcacttgg...

Basic information

species Glycine max
transcript GLYMA15G00250.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193474091|gb|FK440172.1|FK440172
EST:     AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCT                         GTAGAAATTACTGATGTACCTGCCGATGCGAAGGACAAAGACGAGATT
genomic: AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCTgtgagtaagc ... gttcttgtagGTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATT
EST: gi|254344017|gb|GR850927.1|GR850927
EST:     AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCT                         GTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATTCTT
genomic: AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCTgtgagtaagc ... gttcttgtagGTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATTCTT
EST: gi|7147178|gb|AW509100.1|AW509100
EST:     AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCT                         GTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATTCTT
genomic: AGAGAGAACAGCATCCTATTAACCAGAGGGAAAAACACACCCTTTATCCTgtgagtaagc ... gttcttgtagGTAGAAATTACTGATGTACCTGCCGATACGAAGGACAAAGACGAGATTCTT