1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
TGCACACACTGATTCCATCATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttgaaatatcatgcttctttttatttaatgaaaaaaaaatcaagggaaataaaataaaaagatgtttcactcaattctctactttgtagcgtc...
species | Glycine max |
transcript | GLYMA14G07120.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATTEST: gi|6072812|gb|AW102199.1|AW102199
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATTEST: gi|193710229|gb|FK642927.1|FK642927
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGEST: gi|16345479|gb|BI971074.1|BI971074
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATG
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATTEST: gi|208153176|gb|GD949189.1|GD949189
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
EST: TTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATTEST: gi|16342203|gb|BI967798.1|BI967798
genomic: TTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATTEST: gi|19269540|gb|BM885796.1|BM885796
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
EST: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAG TGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
genomic: ATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttg ... gtattggcagTGCTGCTGTTTTTCACAATGCAAGCACCAGATTTAGTGATGGGGCACGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCACACACTGATTCCATCATTGCAGAAGATAAAGAAGTTGCTAATGTGTTTCTACGCCAAGTAGACAGgtaatatttgaaatatcatgcttctttttatttaatgaaaaaaaaatcaagggaaataaaataaaaagatgtttcactcaattctctactttgtagcgtc
- - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aataaaaa