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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATGGACAGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactctcgtactttgattttatttttttatttttttttaaattggttattaattgaaattgtttatattttattttaccattgatttccataagt...

Basic information

species Glycine max
transcript GLYMA13G42230.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21601173|gb|BQ611504.1|BQ611504
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
EST: gi|21887595|gb|BQ740808.1|BQ740808
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
EST: gi|24136028|gb|BU926538.1|BU926538
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
EST: gi|22930642|gb|BU547789.1|BU547789
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACNNNGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
EST: gi|9205412|gb|BE331636.1|BE331636
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
EST: gi|14205753|gb|BG839431.1|BG839431
EST:     AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCT                         GAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT
genomic: AGCTTCTTGGTCATCCTAGGCAATCTTTATACATGCCGAGTTACTTGCCTgtaagaactc ... tattttacagGAAATGCAATACAAGGGACGAGATTATTGACGACTTGGCTATTCGTATTCT