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TGAAGACTTTGGACATGACAAAGAACATCATTCAGCTGAAGATGTGAAAGTAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatgcaactagtagatgatgaattggtactgtattttttttttatttttaaaatttcattagaaagagaaatgtagttaattacgggggaggat...
species | Glycine max |
transcript | GLYMA13G19230.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: AATGGGCCTAGTATTCCCCAGATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTTEST: gi|21602116|gb|BQ612447.1|BQ612447
genomic: AATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatg ... tgttgtgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTT
EST: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTTEST: gi|13481639|gb|BG510982.1|BG510982
genomic: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatg ... tgttgtgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTT
EST: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATG ATATGNCAGTGGGGGTGANTGGAAGCCCTATTTCAAGCAAGCGGACTGCTCEST: gi|151394618|gb|EV264489.1|EV264489
genomic: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatg ... tgttgtgtagATATG-CAGTGGGGGTGA-TGGAAGCCCTATTTCAAGCAAGCGGACTGCTC
EST: TAAACTACGTGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTTEST: gi|18735275|gb|BM528670.1|BM528670
genomic: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatg ... tgttgtgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTT
EST: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTC----- ATAT---GTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTT
genomic: TAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatg ... tgttgtgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCGGACTGCTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAGACTTTGGACATGACAAAGAACATCATTCAGCTGAAGATGTGAAAGTAAACTACATGACAGACAATGGGCCTAGTATTCCCCAGATTCTTCATATGgtgagtcatgcaactagtagatgatgaattggtactgtattttttttttatttttaaaatttcattagaaagagaaatgtagttaattacgggggaggat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaagaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggggagg