1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GGGAGGAAGAGTTGCAGAGGAGCTTATCTTTGGCCAGGATTATGTCACAACTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttctgctccctgtattgtgtcatgtgcagtcttgcatctgctaaactagagatcacttttattaaaaaattatgcttgtataatattttcttgc...
species | Glycine max |
transcript | GLYMA13G08160.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATG GTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAGEST: gi|10843451|gb|BF066749.1|BF066749
genomic: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttct ... tatgcacaagGTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAG
EST: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATG GTATCGAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAGEST: gi|22524409|gb|BU083220.1|BU083220
genomic: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttct ... tatgcacaagGTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAG
EST: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATG GTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATEST: gi|26058971|gb|CA801885.1|CA801885
genomic: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttct ... tatgcacaagGTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAAT
EST: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATG GTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAG
genomic: CTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttct ... tatgcacaagGTATCAAATTGTGGGATGAGTGATGCAATCGGGCCAGTTAATATAAAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAGGAAGAGTTGCAGAGGAGCTTATCTTTGGCCAGGATTATGTCACAACTGGAGCAAGTAGTGATCTCCACACTGCTACTGAGCTTGCCCAATACATGgtaattttctgctccctgtattgtgtcatgtgcagtcttgcatctgctaaactagagatcacttttattaaaaaattatgcttgtataatattttcttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT