1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TGAAGGTTTTGGTCGAGCAGATTATTTCCTTGTGGGCAAGGACTTCCCCAGCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtatagactttcttcctctttgctgacaaatatttgtttcacctgctagcctgttggaagcacgcaccaattccatgtttattataagcatgtt...
species | Glycine max |
transcript | GLYMA13G06040.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|192328721|gb|FK023193.1|FK023193
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|192310952|gb|FK001589.1|FK001589
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|16277657|gb|BI942495.1|BI942495
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|7795091|gb|AW780488.1|AW780488
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|16284113|gb|BI945912.1|BI945912
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|19935124|gb|BQ080154.1|BQ080154
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGCEST: gi|11687653|gb|BF595329.1|BF595329
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
EST: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACT AAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
genomic: GCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtat ... atgggtgcagAAATGGACAAGAATGTCGATATTGAACACAGCAGGCTCATACAAGTTTAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAGGTTTTGGTCGAGCAGATTATTTCCTTGTGGGCAAGGACTTCCCCAGCTACATAGAATGCCAAGAGAAGGTTGATGAAGCATACCGGAACCAAACTgtgagtgtatagactttcttcctctttgctgacaaatatttgtttcacctgctagcctgttggaagcacgcaccaattccatgtttattataagcatgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cttcctc