1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
GCAACCAAGCACCTAGTGTAAGCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccatatttgtttccatttcctttttggtttgcttgttgattgaagttttcttattaaacgttagtgggtgtgtttatgcag
species | Glycine max |
transcript | GLYMA12G28910.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAG ACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTGEST: gi|7925871|gb|AW831897.1|AW831897
genomic: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccat ... gtttatgcagACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTG
EST: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAG ACTGTTACTGCTGTAGAATGGC-CCGGAAAAGGTGACTACTTTTCGACAGTEST: gi|6951596|gb|AW423664.1|AW423664
genomic: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccat ... gtttatgcagACTGTTACTGCTGTAGAATGGCACCGGAAA-GGTGACTACTTTTCGACAGT
EST: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAG ACTGTTACTGCTGTAAAATGGCACCGGAAAGGTGACTACTTTTCGACAGTGEST: gi|58016136|gb|CX702878.1|CX702878
genomic: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccat ... gtttatgcagACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTG
EST: GCTGGCTAAAAGATGATAAACATATGGGTTAAAGGTTAAGGCACTTTAAG ACTGTTACTGCTGTAGAATGGCACCGAAAAGGTGACTACTTTTCGACAGTGEST: gi|58015214|gb|CX701956.1|CX701956
genomic: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccat ... gtttatgcagACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTG
EST: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAG ACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTG
genomic: GCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccat ... gtttatgcagACTGTTACTGCTGTAGAATGGCACCGGAAAGGTGACTACTTTTCGACAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAACCAAGCACCTAGTGTAAGCTGGCTTAAAGATGATAAACATATGGGTTTAAGGTTAAGGCACTTTAAGgtatttccatatttgtttccatttcctttttggtttgcttgttgattgaagttttcttattaaacgttagtgggtgtgtttatgcag
- - - - - - - - - - - - - - - AAGATG