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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTGAGACACTAGCCGATCATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCTGCCATAGTTAATgtatggttcttttccccatagaaggacatttgtgtttttggaaatttaggcttgctatatttgatgctgaacctctatgatgctattttcag

Basic information

species Glycine max
transcript GLYMA11G11490.2
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7028762|gb|AW458545.1|AW458545
EST:     ATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCTGCCATAGTTAAT                         TTACTCGGAATTATGGGAGAATTCACACCAGAGCAACAGCGTGCCTTCTGT
genomic: ATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCTGCCATAGTTAATgtatggttct ... ctattttcagTTACTCGGAATTATGGGAGAATTCACACCAGAGCAACAGCGTGCCTTCTGT
EST: gi|208175474|gb|GD976869.1|GD976869
EST:     ATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCTGCCATAGTTAAT                         TTACTCGGAATTATGGGAGAATTCACACCAGAGCAACAGCGTGCCTTCTGT
genomic: ATATAAAATTTGACCATGGTTATACTGCCAAGAGCCCTGCCATAGTTAATgtatggttct ... ctattttcagTTACTCGGAATTATGGGAGAATTCACACCAGAGCAACAGCGTGCCTTCTGT