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AGTTGAGATGGAAAAGGCTTTAAACGACAATCCCATGAAATCAGCATCCGACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttctataactgaaagtggttattcttggttgcgtctaatgaaatattttattctatggttctatctctttcaagtatgaagccaattttactctttgaaaattgtatttcatataaaatgactttttgttttgaatctgatttgatggtatggtggcag
species | Glycine max |
transcript | GLYMA11G03650.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGA CTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTTEST: gi|15200671|gb|BI424469.1|BI424469
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTT
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAAA CTATTACAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTTEST: gi|151403372|gb|EV273182.1|EV273182
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTT
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGA CTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTTEST: gi|15201374|gb|BI424836.1|BI424836
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTT
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGA CTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTTEST: gi|207765805|gb|GD735124.1|GD735124
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTT
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGA CTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTTEST: gi|208269653|gb|GE072145.1|GE072145
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCAAAGATTCCTTCGGTT
EST: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGA CTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCA
genomic: ACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttct ... atggtggcagCTATTAGAAGGATTGCAGAGCTCTTTGATCATCTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTTGAGATGGAAAAGGCTTTAAACGACAATCCCATGAAATCAGCATCCGACATGGTTGAGCCCCGGAGATCCAATCGCAGGATCCAGCCAACATCAAGAgtaagtttctataactgaaagtggttattcttggttgcgtctaatgaaatattttattctatggttctatctctttcaagtatgaagccaattttactctttgaaaattgtatttcatataaaatgactttttgttttgaatctgatttgatggtatggtggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC