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GATGGCCTTTTAGTTATGTCACAGACCAGCATGGTCCCTCCTAATGCACCTCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAGgtatataatatcttaaatttgtgagaatgtatctgcaccaaaatgatcaagtattgtcagcatatttaaccaataagtttttcttttttaaaaaagaaaa...
species | Glycine max |
transcript | GLYMA09G18490.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAG ATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTAEST: gi|51343191|gb|CO983924.1|CO983924
genomic: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAGgtatataata ... tgctttgcagATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTA
EST: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAG ATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTAEST: gi|208271958|gb|GE070966.1|GE070966
genomic: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAGgtatataata ... tgctttgcagATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTA
EST: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAG ATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTA
genomic: TCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAGgtatataata ... tgctttgcagATTTGCAAAGAAACTGTTGAGGCAGAAGTGTAGATTGCTGATACCCACTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGCCTTTTAGTTATGTCACAGACCAGCATGGTCCCTCCTAATGCACCTCTATTGTATGCTCTTGTTATGACCCTTACCTATACAAGAAAATTTACAGgtatataatatcttaaatttgtgagaatgtatctgcaccaaaatgatcaagtattgtcagcatatttaaccaataagtttttcttttttaaaaaagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaaa