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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCTCTTGTTCAGTTCTGGTGTAGCTATATGACAGTGCCCCTGAACGTAATAGTTTCACAGgttggcttaactctcatattttgtattagtgttacaacagaaaatttatttgatcccattttgatttgatgactcactgcag

Basic information

species Glycine max
transcript GLYMA08G20120.1
intron # 14
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G20120.1 (Glycine max), 5'ss of exon 14
lower sequence: Vv12s0035g00260.t01 (Vitis vinifera), 5'ss of exon 14
TGCTCTTGTTCAGTTCTGGTGTAGCTATATGACAGTGCCCCTGAACGTAATAGTTTCACAGgttggcttaactc----tcatattttgtattagtgttacaacag--aaaatttatttgatcccattttgatttgatgactcactgcag------------
 | |||||||||||||||||||||||||   || ||||| |||||||||||  |  |||||||  | | |        | ||||||    | ||    |  |  |  |||| ||  ||  ||  |  ||    ||| | |  | ||               
GGTTCTTGTTCAGTTCTGGTGTAGCTATTGCACTGTGCCTCTGAACGTAATTATCACACAGgtatgttgagaataagataatatttcagttgagacaaatgaagggaaaaactttgtttctcggacattagaatgaaggcaaaatgtttgtttcctgtcta