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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaatgttatgcatgtttcatacagttttattcgtctctcaaaaattcatatatacaagttttctatgctgtaccgaaccatgaataggcctata...

Basic information

species Glycine max
transcript GLYMA05G30830.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10256404|gb|BE824170.1|BE824170
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
EST: gi|207713488|gb|GD696171.1|GD696171
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
EST: gi|13312427|gb|BG406078.1|BG406078
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAA-GGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
EST: gi|7146333|gb|AW508255.1|AW508255
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
EST: gi|193459553|gb|FK423410.1|FK423410
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
EST: gi|14009195|gb|BG725799.1|BG725799
EST:     GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGG                         GTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA
genomic: GGAGAATCACAATCTGGGAAAGCGCCATGGCAAGGGgtatgttaat ... ttggtggcagGTGAGGGAGAGATGTAAAAGGGAGTGGACAATGTTCCAGAGTCGGTTGGCA