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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAAACAGATGGGCAGCTACTATTGGCACGGACGGGACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatatgcatcctcagtatactttttaacttcagcacttgtctacaattttaatccgaactatatactatataggtatttcagtagattgacttta...

Basic information

species Glycine max
transcript GLYMA05G27900.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193533398|gb|FK493750.1|FK493750
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|208307075|gb|GE103239.1|GE103239
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|208195868|gb|GD994429.1|GD994429
EST:     CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|207696288|gb|GD677783.1|GD677783
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|207806471|gb|GD777436.1|GD777436
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|208126411|gb|GD925655.1|GD925655
EST:     CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|208252611|gb|GE046147.1|GE046147
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|193566450|gb|FK522437.1|FK522437
EST:     ACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|13480605|gb|BG509948.1|BG509948
EST:     ACTATTGGCACGGACGGGACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: ACTATTGGCACGGACGGGACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|208089246|gb|GD886507.1|GD886507
EST:     GACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: GACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
EST: gi|193442359|gb|FK407344.1|FK407344
EST:     CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAG                         ACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA
genomic: CGGGACGATAGGACAATGCGTGAAGTAAATCCTAAGgttctaatat ... gcattttcagACACTGTCCTCTGGTTTGGATGATTATCCACGAGCTTCACACCCAAGTGAA