1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GGCGATGATGAATGTGCTACCCTCGCAGATGTGAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGgtaagctatttgatagttcaatagtggcaatgtggtttgccatcctattatgttattgcaaataatcttttttatcttcttaaagtggaaattttagatacataaaagtcagaaaagaattatattcatctttcgcag
species | Glycine max |
transcript | GLYMA04G07850.2 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATGAAAATCGAGATATTGCTG ATGAGCTTTGTGATGATAAAAT-GA-CTCCAGCACACCGAGGAAGGGTTCCEST: gi|22928064|gb|BU545203.1|BU545203
genomic: ATGAAAATCGAGATATTGCTGgtaagctatt ... tctttcgcagATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCC
EST: TCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTG ATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCCEST: gi|15664618|gb|BI701989.1|BI701989
genomic: TCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGgtaagctatt ... tctttcgcagATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCC
EST: ATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTG ATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCC
genomic: ATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGgtaagctatt ... tctttcgcagATGAGCTTTGTGATGATAAAATGGATCTGCAGCATACCGAGGAAGGGTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCGATGATGAATGTGCTACCCTCGCAGATGTGAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGgtaagctatttgatagttcaatagtggcaatgtggtttgccatcctattatgttattgcaaataatcttttttatcttcttaaagtggaaattttagatacataaaagtcagaaaagaattatattcatctttcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC