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ATAACATCAGCATTTGATGGCACCCGAATTTCTAAATGGGAAGAACCAAACGGAGCAAGAGgtatagttaaccaaataaataacttacaacatcagattatggtttaaacttaaacagagttctatagaattgataaatctcccattagaaaagaacaact...
species | Glycine max |
transcript | GLYMA03G40660.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATTTGATGGCACCCGAATTTCTAAATGGGAAGAACCAAACGGAGCAAGAG GTTGTTGGGTCGTGTATAGAACATTTGGTAACGAGATGTTTGAGCTTGTAGEST: gi|15000214|gb|BI321028.1|BI321028
genomic: ATTTGATGGCACCCGAATTTCTAAATGGGAAGAACCAAACGGAGCAAGAGgtatagttaa ... gacttcgtagGTTGTTGGGTCGTGTATAGAACATTTGGTAACGAGATGTTTGAGCTTGTAG
EST: ACCAAACGGAGCAAGAG GTTGTTGGGTTCCG-G-ATAGAACATTTGGTAACGAGATGTTTGAGCTTGT
genomic: ACCAAACGGAGCAAGAGgtatagttaa ... gacttcgtagGTTGTTGGG-T-CGTGTATAGAACATTTGGTAACGAGATGTTTGAGCTTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAACATCAGCATTTGATGGCACCCGAATTTCTAAATGGGAAGAACCAAACGGAGCAAGAGgtatagttaaccaaataaataacttacaacatcagattatggtttaaacttaaacagagttctatagaattgataaatctcccattagaaaagaacaact
- - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaagaa