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GCATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGATGTAAAAATTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatgcaactagtataggataagttggttttttaattttattattcggaaaaccaaaagatcctgtagaaagagaaatattgtgagaaaaaatag...
species | Glycine max |
transcript | GLYMA03G32710.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTTTTEST: gi|22522450|gb|BU081261.1|BU081261
genomic: ATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatg ... tgttttgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTT
EST: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTEST: gi|22523884|gb|BU082695.1|BU082695
genomic: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatg ... tgttttgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTT
EST: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTEST: gi|17964349|gb|BM271085.1|BM271085
genomic: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatg ... tgttttgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTT
EST: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATG ATATGCAGTGNGGGTGATGGAAGCCCTATTTCAAGTAAACGEST: gi|58021485|gb|CX708226.1|CX708226
genomic: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatg ... tgttttgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACG
EST: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATG ATATGCAGTGGGGGTGATGGAAGCCNTATTTCAAGTAAACGGACTGCTCTT
genomic: TTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatg ... tgttttgtagATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGATGTAAAAATTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGgtgagttatgcaactagtataggataagttggttttttaattttattattcggaaaaccaaaagatcctgtagaaagagaaatattgtgagaaaaaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaagaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agaaaaaa