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GGATATGCTGAGACAACTGGGTTTACATCATGATTATGTTTTACTGCTCGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttctactgtgctgactcctggtataggaagtaattaggcattattttagataattaggagagcagggagatgatggaaaactgaggactctggtg...
species | Glycine max |
transcript | GLYMA03G30320.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACG GTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATEST: gi|254340872|gb|GR854600.1|GR854600
genomic: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttcta ... ttactttcagGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAAT
EST: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACG GTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATEST: gi|58019831|gb|CX706573.1|CX706573
genomic: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttcta ... ttactttcagGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAAT
EST: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACG GTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATEST: gi|209699815|gb|BW661125.1|BW661125
genomic: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttcta ... ttactttcagGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAAT
EST: ACTACCTTGAAGCCTTACGATATGCACGGAAATACACG GTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATEST: gi|5688270|gb|AI941285.1|AI941285
genomic: ACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttcta ... ttactttcagGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAAT
EST: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACG GTGGATACCATCCGGCCATCATTGNTCTTAGAAGCAGCATTTGTTTCCAAT
genomic: TGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttcta ... ttactttcagGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATATGCTGAGACAACTGGGTTTACATCATGATTATGTTTTACTGCTCGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACACGgtaatttctactgtgctgactcctggtataggaagtaattaggcattattttagataattaggagagcagggagatgatggaaaactgaggactctggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC