1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
TGCTGCCACTGGTCCACTTGGGAAGGAACTCTTTGAAAAGGAACAGGATGATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatttatttgactaaatttattttgtttatcataagaataattttccactaaaatgaggttacttagggtgtctttggttgtgcttttggtttt...
species | Glycine max |
transcript | GLYMA02G46350.2 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGA ATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATTEST: gi|192313377|gb|FK005149.1|FK005149
genomic: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatt ... actattatagATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
EST: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGA ATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATTEST: gi|13481375|gb|BG510718.1|BG510718
genomic: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatt ... actattatagATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
EST: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGA ATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATTEST: gi|207762521|gb|GD732108.1|GD732108
genomic: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatt ... actattatagATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
EST: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGA ATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATTEST: gi|192313376|gb|FK005148.1|FK005148
genomic: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatt ... actattatagATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
EST: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGA ATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
genomic: ATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatt ... actattatagATCAATGAGTTTGTAAAACGGGCCCGAGCAGCCAAGATACATGCTTACATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCTGCCACTGGTCCACTTGGGAAGGAACTCTTTGAAAAGGAACAGGATGATCTACTCTCGGATCTGAAAGATGTACCAAAAGCAGCTTGTGATCGAAGAgtgagttatttatttgactaaatttattttgtttatcataagaataattttccactaaaatgaggttacttagggtgtctttggttgtgcttttggtttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA