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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATAAAGATAGATGATCAAGATATTCGGGAGGTAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTgtaagttgaacaaagcgcctatctccatgatctcatgtcatttcatgtgccagatcttgcaatttgtgaaaacctgaatgattgtggacag

Basic information

species Glycine max
transcript GLYMA02G40490.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193644846|gb|FK592054.1|FK592054
EST:     TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACT                         GTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCT
genomic: TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTgtaagttgaa ... ttgtggacagGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCT
EST: gi|51341587|gb|CO982904.1|CO982904
EST:     TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACT                         GTACTTTTCAATGATACAATATTTCATAACATTCACTATGCTCGGCTTTCT
genomic: TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTgtaagttgaa ... ttgtggacagGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCT
EST: gi|193689046|gb|FK630067.1|FK630067
EST:     TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACT                         GTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCT
genomic: TAACCTTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTgtaagttgaa ... ttgtggacagGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTTTCT