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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATTATTTGTCGCCATTAGACATCATGGGTAGATATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGgtaagatggttgttttttaaatttgaaaatttgttggcttttttatttctatttttattaataaggacaaactgcctttttttatgccatgttttctttg...

Basic information

species Glycine max
transcript GLYMA02G14210.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7028778|gb|AW458561.1|AW458561
EST:     ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTG                         GGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT
genomic: ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGgtaagatggt ... aattttgcagGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT
EST: gi|10252639|gb|BE820405.1|BE820405
EST:     ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTG                         GGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT
genomic: ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGgtaagatggt ... aattttgcagGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT
EST: gi|16995635|gb|BM085007.1|BM085007
EST:     ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTG                         GGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT
genomic: ATCCACATTTAGTTGTCATAGGAACTGGACTTACTTTCGGTTATCTTGTGgtaagatggt ... aattttgcagGGAAGGATGATTTTGGCACACTTATGTGATGAACCTAAGGGTCTGAAAACT